Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4175 |
| Number of amino acids: | 436 |
| Molecular Weight: | 48000.26 Da |
| Theoretical pI: | 5.85 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 36 | 8.26% |
| Cysteine CYS (C) | 9 | 2.06% |
| Glutamic Acid GLU (E) | 15 | 3.44% |
| Aspartic Acid ASP (D) | 35 | 8.03% |
| Glycine GLY (G) | 47 | 10.78% |
| Phynylalanine PHE (F) | 15 | 3.44% |
| Isoleucine ILE (I) | 15 | 3.44% |
| Histidine HIS (H) | 12 | 2.75% |
| Lysine LYS (K) | 25 | 5.73% |
| Methionine MET (M) | 10 | 2.29% |
| Leucine LEU (L) | 34 | 7.8% |
| Asparagine ASN (N) | 18 | 4.13% |
| Glutamine GLN (Q) | 19 | 4.36% |
| Proline PRO (P) | 19 | 4.36% |
| Serine SER (S) | 22 | 5.05% |
| Arginine ARG (R) | 17 | 3.9% |
| Threonine THR (T) | 20 | 4.59% |
| Tryptophan TRP (W) | 15 | 3.44% |
| Valine VAL (V) | 38 | 8.72% |
| Tyrosine TYR (Y) | 15 | 3.44% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2145 |
| Hydrogen | H | 3270 |
| Nitrogen | N | 588 |
| Oxygen | O | 631 |
| Sulphur | S | 19 |
| Formula | C2145H3270N588O631S19 |
| Total Number of Atoms: | 6653 |
| Total number of positively charged residues (ARG + LYS): | 42 |
| Total number of negatively charged residues (ASP + GLU): | 50 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 105350 Absorption 0.1% (=1 g/l) 2.195, assuming all pairs of CYS residues form cystines Ext. coefficient 104850 Absorption 0.1% (=1 g/l) 2.184, assuming all CYS residues are reduced |
| Aromaticity: | 0.103 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 23.24 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.28, 24.31, 21.79] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 77.3624 |
| Grand average of hydropathicity (GRAVY): | -0.29 |