Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4173 |
| Number of amino acids: | 768 |
| Molecular Weight: | 84459.67 Da |
| Theoretical pI: | 9.04 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 39 | 5.08% |
| Cysteine CYS (C) | 9 | 1.17% |
| Glutamic Acid GLU (E) | 25 | 3.26% |
| Aspartic Acid ASP (D) | 35 | 4.56% |
| Glycine GLY (G) | 55 | 7.16% |
| Phynylalanine PHE (F) | 33 | 4.3% |
| Isoleucine ILE (I) | 40 | 5.21% |
| Histidine HIS (H) | 17 | 2.21% |
| Lysine LYS (K) | 32 | 4.17% |
| Methionine MET (M) | 16 | 2.08% |
| Leucine LEU (L) | 85 | 11.07% |
| Asparagine ASN (N) | 38 | 4.95% |
| Glutamine GLN (Q) | 35 | 4.56% |
| Proline PRO (P) | 76 | 9.9% |
| Serine SER (S) | 81 | 10.55% |
| Arginine ARG (R) | 39 | 5.08% |
| Threonine THR (T) | 37 | 4.82% |
| Tryptophan TRP (W) | 9 | 1.17% |
| Valine VAL (V) | 45 | 5.86% |
| Tyrosine TYR (Y) | 22 | 2.86% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3794 |
| Hydrogen | H | 5941 |
| Nitrogen | N | 1033 |
| Oxygen | O | 1102 |
| Sulphur | S | 25 |
| Formula | C3794H5941N1033O1102S25 |
| Total Number of Atoms: | 11895 |
| Total number of positively charged residues (ARG + LYS): | 71 |
| Total number of negatively charged residues (ASP + GLU): | 60 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 82780 Absorption 0.1% (=1 g/l) 0.980, assuming all pairs of CYS residues form cystines Ext. coefficient 82280 Absorption 0.1% (=1 g/l) 0.974, assuming all CYS residues are reduced |
| Aromaticity: | 0.083 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 51.85 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.47, 32.55, 21.48] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 85.5468 |
| Grand average of hydropathicity (GRAVY): | -0.24 |