Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4169 |
| Number of amino acids: | 708 |
| Molecular Weight: | 77872.64 Da |
| Theoretical pI: | 6.85 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 42 | 5.93% |
| Cysteine CYS (C) | 25 | 3.53% |
| Glutamic Acid GLU (E) | 34 | 4.8% |
| Aspartic Acid ASP (D) | 39 | 5.51% |
| Glycine GLY (G) | 52 | 7.34% |
| Phynylalanine PHE (F) | 36 | 5.08% |
| Isoleucine ILE (I) | 43 | 6.07% |
| Histidine HIS (H) | 18 | 2.54% |
| Lysine LYS (K) | 30 | 4.24% |
| Methionine MET (M) | 14 | 1.98% |
| Leucine LEU (L) | 70 | 9.89% |
| Asparagine ASN (N) | 32 | 4.52% |
| Glutamine GLN (Q) | 19 | 2.68% |
| Proline PRO (P) | 31 | 4.38% |
| Serine SER (S) | 83 | 11.72% |
| Arginine ARG (R) | 41 | 5.79% |
| Threonine THR (T) | 38 | 5.37% |
| Tryptophan TRP (W) | 8 | 1.13% |
| Valine VAL (V) | 39 | 5.51% |
| Tyrosine TYR (Y) | 14 | 1.98% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3425 |
| Hydrogen | H | 5396 |
| Nitrogen | N | 956 |
| Oxygen | O | 1041 |
| Sulphur | S | 39 |
| Formula | C3425H5396N956O1041S39 |
| Total Number of Atoms: | 10857 |
| Total number of positively charged residues (ARG + LYS): | 71 |
| Total number of negatively charged residues (ASP + GLU): | 73 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 66360 Absorption 0.1% (=1 g/l) 0.852, assuming all pairs of CYS residues form cystines Ext. coefficient 64860 Absorption 0.1% (=1 g/l) 0.833, assuming all CYS residues are reduced |
| Aromaticity: | 0.082 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 46.40 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.66, 27.97, 22.60] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 84.1526 |
| Grand average of hydropathicity (GRAVY): | -0.13 |