Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4167 |
| Number of amino acids: | 779 |
| Molecular Weight: | 86342.05 Da |
| Theoretical pI: | 5.14 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 49 | 6.29% |
| Cysteine CYS (C) | 19 | 2.44% |
| Glutamic Acid GLU (E) | 49 | 6.29% |
| Aspartic Acid ASP (D) | 36 | 4.62% |
| Glycine GLY (G) | 71 | 9.11% |
| Phynylalanine PHE (F) | 38 | 4.88% |
| Isoleucine ILE (I) | 42 | 5.39% |
| Histidine HIS (H) | 16 | 2.05% |
| Lysine LYS (K) | 40 | 5.13% |
| Methionine MET (M) | 19 | 2.44% |
| Leucine LEU (L) | 53 | 6.8% |
| Asparagine ASN (N) | 60 | 7.7% |
| Glutamine GLN (Q) | 24 | 3.08% |
| Proline PRO (P) | 33 | 4.24% |
| Serine SER (S) | 54 | 6.93% |
| Arginine ARG (R) | 20 | 2.57% |
| Threonine THR (T) | 54 | 6.93% |
| Tryptophan TRP (W) | 18 | 2.31% |
| Valine VAL (V) | 51 | 6.55% |
| Tyrosine TYR (Y) | 33 | 4.24% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3851 |
| Hydrogen | H | 5835 |
| Nitrogen | N | 1013 |
| Oxygen | O | 1175 |
| Sulphur | S | 38 |
| Formula | C3851H5835N1013O1175S38 |
| Total Number of Atoms: | 11912 |
| Total number of positively charged residues (ARG + LYS): | 60 |
| Total number of negatively charged residues (ASP + GLU): | 85 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 149295 Absorption 0.1% (=1 g/l) 1.729, assuming all pairs of CYS residues form cystines Ext. coefficient 148170 Absorption 0.1% (=1 g/l) 1.716, assuming all CYS residues are reduced |
| Aromaticity: | 0.114 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 31.30 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.17, 27.98, 21.82] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 72.837 |
| Grand average of hydropathicity (GRAVY): | -0.29 |