Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4162 |
| Number of amino acids: | 658 |
| Molecular Weight: | 74978.23 Da |
| Theoretical pI: | 6.23 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 38 | 5.78% |
| Cysteine CYS (C) | 13 | 1.98% |
| Glutamic Acid GLU (E) | 49 | 7.45% |
| Aspartic Acid ASP (D) | 34 | 5.17% |
| Glycine GLY (G) | 40 | 6.08% |
| Phynylalanine PHE (F) | 33 | 5.02% |
| Isoleucine ILE (I) | 31 | 4.71% |
| Histidine HIS (H) | 14 | 2.13% |
| Lysine LYS (K) | 26 | 3.95% |
| Methionine MET (M) | 14 | 2.13% |
| Leucine LEU (L) | 66 | 10.03% |
| Asparagine ASN (N) | 40 | 6.08% |
| Glutamine GLN (Q) | 17 | 2.58% |
| Proline PRO (P) | 29 | 4.41% |
| Serine SER (S) | 49 | 7.45% |
| Arginine ARG (R) | 51 | 7.75% |
| Threonine THR (T) | 31 | 4.71% |
| Tryptophan TRP (W) | 9 | 1.37% |
| Valine VAL (V) | 50 | 7.6% |
| Tyrosine TYR (Y) | 24 | 3.65% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3335 |
| Hydrogen | H | 5199 |
| Nitrogen | N | 931 |
| Oxygen | O | 986 |
| Sulphur | S | 27 |
| Formula | C3335H5199N931O986S27 |
| Total Number of Atoms: | 10478 |
| Total number of positively charged residues (ARG + LYS): | 77 |
| Total number of negatively charged residues (ASP + GLU): | 83 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 86010 Absorption 0.1% (=1 g/l) 1.147, assuming all pairs of CYS residues form cystines Ext. coefficient 85260 Absorption 0.1% (=1 g/l) 1.137, assuming all CYS residues are reduced |
| Aromaticity: | 0.100 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 43.70 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.37, 24.01, 25.38] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 85.304 |
| Grand average of hydropathicity (GRAVY): | -0.32 |