Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4161 |
| Number of amino acids: | 830 |
| Molecular Weight: | 92316.36 Da |
| Theoretical pI: | 8.22 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 49 | 5.9% |
| Cysteine CYS (C) | 23 | 2.77% |
| Glutamic Acid GLU (E) | 30 | 3.61% |
| Aspartic Acid ASP (D) | 44 | 5.3% |
| Glycine GLY (G) | 47 | 5.66% |
| Phynylalanine PHE (F) | 49 | 5.9% |
| Isoleucine ILE (I) | 47 | 5.66% |
| Histidine HIS (H) | 13 | 1.57% |
| Lysine LYS (K) | 31 | 3.73% |
| Methionine MET (M) | 16 | 1.93% |
| Leucine LEU (L) | 77 | 9.28% |
| Asparagine ASN (N) | 42 | 5.06% |
| Glutamine GLN (Q) | 33 | 3.98% |
| Proline PRO (P) | 39 | 4.7% |
| Serine SER (S) | 82 | 9.88% |
| Arginine ARG (R) | 48 | 5.78% |
| Threonine THR (T) | 64 | 7.71% |
| Tryptophan TRP (W) | 5 | 0.6% |
| Valine VAL (V) | 62 | 7.47% |
| Tyrosine TYR (Y) | 29 | 3.49% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 4109 |
| Hydrogen | H | 6437 |
| Nitrogen | N | 1111 |
| Oxygen | O | 1229 |
| Sulphur | S | 39 |
| Formula | C4109H6437N1111O1229S39 |
| Total Number of Atoms: | 12925 |
| Total number of positively charged residues (ARG + LYS): | 79 |
| Total number of negatively charged residues (ASP + GLU): | 74 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 72085 Absorption 0.1% (=1 g/l) 0.781, assuming all pairs of CYS residues form cystines Ext. coefficient 70710 Absorption 0.1% (=1 g/l) 0.766, assuming all CYS residues are reduced |
| Aromaticity: | 0.100 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 41.67 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.41, 25.30, 20.72] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 85.8313 |
| Grand average of hydropathicity (GRAVY): | -0.07 |