Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4156 |
| Number of amino acids: | 577 |
| Molecular Weight: | 63679.88 Da |
| Theoretical pI: | 8.76 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 55 | 9.53% |
| Cysteine CYS (C) | 8 | 1.39% |
| Glutamic Acid GLU (E) | 18 | 3.12% |
| Aspartic Acid ASP (D) | 25 | 4.33% |
| Glycine GLY (G) | 39 | 6.76% |
| Phynylalanine PHE (F) | 27 | 4.68% |
| Isoleucine ILE (I) | 20 | 3.47% |
| Histidine HIS (H) | 21 | 3.64% |
| Lysine LYS (K) | 17 | 2.95% |
| Methionine MET (M) | 17 | 2.95% |
| Leucine LEU (L) | 41 | 7.11% |
| Asparagine ASN (N) | 26 | 4.51% |
| Glutamine GLN (Q) | 19 | 3.29% |
| Proline PRO (P) | 50 | 8.67% |
| Serine SER (S) | 29 | 5.03% |
| Arginine ARG (R) | 32 | 5.55% |
| Threonine THR (T) | 46 | 7.97% |
| Tryptophan TRP (W) | 10 | 1.73% |
| Valine VAL (V) | 55 | 9.53% |
| Tyrosine TYR (Y) | 22 | 3.81% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2874 |
| Hydrogen | H | 4405 |
| Nitrogen | N | 787 |
| Oxygen | O | 806 |
| Sulphur | S | 25 |
| Formula | C2874H4405N787O806S25 |
| Total Number of Atoms: | 8897 |
| Total number of positively charged residues (ARG + LYS): | 49 |
| Total number of negatively charged residues (ASP + GLU): | 43 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 88280 Absorption 0.1% (=1 g/l) 1.386, assuming all pairs of CYS residues form cystines Ext. coefficient 87780 Absorption 0.1% (=1 g/l) 1.378, assuming all CYS residues are reduced |
| Aromaticity: | 0.102 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.54 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.33, 24.96, 22.70] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 78.4055 |
| Grand average of hydropathicity (GRAVY): | -0.12 |