Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4155 |
| Number of amino acids: | 513 |
| Molecular Weight: | 56463.03 Da |
| Theoretical pI: | 5.02 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 62 | 12.09% |
| Cysteine CYS (C) | 4 | 0.78% |
| Glutamic Acid GLU (E) | 46 | 8.97% |
| Aspartic Acid ASP (D) | 34 | 6.63% |
| Glycine GLY (G) | 31 | 6.04% |
| Phynylalanine PHE (F) | 32 | 6.24% |
| Isoleucine ILE (I) | 24 | 4.68% |
| Histidine HIS (H) | 12 | 2.34% |
| Lysine LYS (K) | 46 | 8.97% |
| Methionine MET (M) | 3 | 0.58% |
| Leucine LEU (L) | 40 | 7.8% |
| Asparagine ASN (N) | 16 | 3.12% |
| Glutamine GLN (Q) | 14 | 2.73% |
| Proline PRO (P) | 32 | 6.24% |
| Serine SER (S) | 26 | 5.07% |
| Arginine ARG (R) | 10 | 1.95% |
| Threonine THR (T) | 17 | 3.31% |
| Tryptophan TRP (W) | 4 | 0.78% |
| Valine VAL (V) | 42 | 8.19% |
| Tyrosine TYR (Y) | 18 | 3.51% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2577 |
| Hydrogen | H | 3953 |
| Nitrogen | N | 647 |
| Oxygen | O | 765 |
| Sulphur | S | 7 |
| Formula | C2577H3953N647O765S7 |
| Total Number of Atoms: | 7949 |
| Total number of positively charged residues (ARG + LYS): | 56 |
| Total number of negatively charged residues (ASP + GLU): | 80 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 49070 Absorption 0.1% (=1 g/l) 0.869, assuming all pairs of CYS residues form cystines Ext. coefficient 48820 Absorption 0.1% (=1 g/l) 0.865, assuming all CYS residues are reduced |
| Aromaticity: | 0.105 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 33.77 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.19, 20.47, 29.43] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 84.4834 |
| Grand average of hydropathicity (GRAVY): | -0.23 |