Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4152 |
| Number of amino acids: | 214 |
| Molecular Weight: | 23887.4 Da |
| Theoretical pI: | 8.77 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 17 | 7.94% |
| Cysteine CYS (C) | 7 | 3.27% |
| Glutamic Acid GLU (E) | 11 | 5.14% |
| Aspartic Acid ASP (D) | 6 | 2.8% |
| Glycine GLY (G) | 12 | 5.61% |
| Phynylalanine PHE (F) | 8 | 3.74% |
| Isoleucine ILE (I) | 7 | 3.27% |
| Histidine HIS (H) | 2 | 0.93% |
| Lysine LYS (K) | 14 | 6.54% |
| Methionine MET (M) | 5 | 2.34% |
| Leucine LEU (L) | 18 | 8.41% |
| Asparagine ASN (N) | 12 | 5.61% |
| Glutamine GLN (Q) | 8 | 3.74% |
| Proline PRO (P) | 16 | 7.48% |
| Serine SER (S) | 15 | 7.01% |
| Arginine ARG (R) | 8 | 3.74% |
| Threonine THR (T) | 17 | 7.94% |
| Tryptophan TRP (W) | 4 | 1.87% |
| Valine VAL (V) | 15 | 7.01% |
| Tyrosine TYR (Y) | 12 | 5.61% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1074 |
| Hydrogen | H | 1660 |
| Nitrogen | N | 280 |
| Oxygen | O | 313 |
| Sulphur | S | 12 |
| Formula | C1074H1660N280O313S12 |
| Total Number of Atoms: | 3339 |
| Total number of positively charged residues (ARG + LYS): | 22 |
| Total number of negatively charged residues (ASP + GLU): | 17 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 40255 Absorption 0.1% (=1 g/l) 1.685, assuming all pairs of CYS residues form cystines Ext. coefficient 39880 Absorption 0.1% (=1 g/l) 1.669, assuming all CYS residues are reduced |
| Aromaticity: | 0.112 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.24 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.91, 25.70, 23.83] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 73.8318 |
| Grand average of hydropathicity (GRAVY): | -0.27 |