Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4151 |
| Number of amino acids: | 246 |
| Molecular Weight: | 27529.39 Da |
| Theoretical pI: | 4.57 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 11 | 4.47% |
| Cysteine CYS (C) | 2 | 0.81% |
| Glutamic Acid GLU (E) | 20 | 8.13% |
| Aspartic Acid ASP (D) | 24 | 9.76% |
| Glycine GLY (G) | 11 | 4.47% |
| Phynylalanine PHE (F) | 7 | 2.85% |
| Isoleucine ILE (I) | 17 | 6.91% |
| Histidine HIS (H) | 6 | 2.44% |
| Lysine LYS (K) | 17 | 6.91% |
| Methionine MET (M) | 4 | 1.63% |
| Leucine LEU (L) | 17 | 6.91% |
| Asparagine ASN (N) | 14 | 5.69% |
| Glutamine GLN (Q) | 6 | 2.44% |
| Proline PRO (P) | 17 | 6.91% |
| Serine SER (S) | 26 | 10.57% |
| Arginine ARG (R) | 7 | 2.85% |
| Threonine THR (T) | 17 | 6.91% |
| Tryptophan TRP (W) | 3 | 1.22% |
| Valine VAL (V) | 12 | 4.88% |
| Tyrosine TYR (Y) | 8 | 3.25% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1206 |
| Hydrogen | H | 1873 |
| Nitrogen | N | 319 |
| Oxygen | O | 406 |
| Sulphur | S | 6 |
| Formula | C1206H1873N319O406S6 |
| Total Number of Atoms: | 3810 |
| Total number of positively charged residues (ARG + LYS): | 24 |
| Total number of negatively charged residues (ASP + GLU): | 44 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 28545 Absorption 0.1% (=1 g/l) 1.037, assuming all pairs of CYS residues form cystines Ext. coefficient 28420 Absorption 0.1% (=1 g/l) 1.032, assuming all CYS residues are reduced |
| Aromaticity: | 0.073 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.25 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.02, 27.64, 21.14] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 72.5203 |
| Grand average of hydropathicity (GRAVY): | -0.71 |