Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4150 |
| Number of amino acids: | 695 |
| Molecular Weight: | 73543.07 Da |
| Theoretical pI: | 3.7 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 41 | 5.9% |
| Cysteine CYS (C) | 6 | 0.86% |
| Glutamic Acid GLU (E) | 44 | 6.33% |
| Aspartic Acid ASP (D) | 166 | 23.88% |
| Glycine GLY (G) | 75 | 10.79% |
| Phynylalanine PHE (F) | 7 | 1.01% |
| Isoleucine ILE (I) | 11 | 1.58% |
| Histidine HIS (H) | 20 | 2.88% |
| Lysine LYS (K) | 23 | 3.31% |
| Methionine MET (M) | 3 | 0.43% |
| Leucine LEU (L) | 45 | 6.47% |
| Asparagine ASN (N) | 44 | 6.33% |
| Glutamine GLN (Q) | 6 | 0.86% |
| Proline PRO (P) | 33 | 4.75% |
| Serine SER (S) | 39 | 5.61% |
| Arginine ARG (R) | 15 | 2.16% |
| Threonine THR (T) | 58 | 8.35% |
| Tryptophan TRP (W) | 3 | 0.43% |
| Valine VAL (V) | 44 | 6.33% |
| Tyrosine TYR (Y) | 12 | 1.73% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3018 |
| Hydrogen | H | 4580 |
| Nitrogen | N | 856 |
| Oxygen | O | 1275 |
| Sulphur | S | 9 |
| Formula | C3018H4580N856O1275S9 |
| Total Number of Atoms: | 9738 |
| Total number of positively charged residues (ARG + LYS): | 38 |
| Total number of negatively charged residues (ASP + GLU): | 210 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 34755 Absorption 0.1% (=1 g/l) 0.473, assuming all pairs of CYS residues form cystines Ext. coefficient 34380 Absorption 0.1% (=1 g/l) 0.467, assuming all CYS residues are reduced |
| Aromaticity: | 0.032 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 19.68 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [17.55, 27.48, 19.14] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 55.6835 |
| Grand average of hydropathicity (GRAVY): | -1.13 |