Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4149 |
| Number of amino acids: | 445 |
| Molecular Weight: | 49100.39 Da |
| Theoretical pI: | 6.37 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 34 | 7.64% |
| Cysteine CYS (C) | 2 | 0.45% |
| Glutamic Acid GLU (E) | 26 | 5.84% |
| Aspartic Acid ASP (D) | 26 | 5.84% |
| Glycine GLY (G) | 28 | 6.29% |
| Phynylalanine PHE (F) | 15 | 3.37% |
| Isoleucine ILE (I) | 26 | 5.84% |
| Histidine HIS (H) | 16 | 3.6% |
| Lysine LYS (K) | 22 | 4.94% |
| Methionine MET (M) | 11 | 2.47% |
| Leucine LEU (L) | 51 | 11.46% |
| Asparagine ASN (N) | 15 | 3.37% |
| Glutamine GLN (Q) | 12 | 2.7% |
| Proline PRO (P) | 39 | 8.76% |
| Serine SER (S) | 32 | 7.19% |
| Arginine ARG (R) | 25 | 5.62% |
| Threonine THR (T) | 22 | 4.94% |
| Tryptophan TRP (W) | 1 | 0.22% |
| Valine VAL (V) | 29 | 6.52% |
| Tyrosine TYR (Y) | 13 | 2.92% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2200 |
| Hydrogen | H | 3496 |
| Nitrogen | N | 602 |
| Oxygen | O | 644 |
| Sulphur | S | 13 |
| Formula | C2200H3496N602O644S13 |
| Total Number of Atoms: | 6955 |
| Total number of positively charged residues (ARG + LYS): | 47 |
| Total number of negatively charged residues (ASP + GLU): | 52 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 24995 Absorption 0.1% (=1 g/l) 0.509, assuming all pairs of CYS residues form cystines Ext. coefficient 24870 Absorption 0.1% (=1 g/l) 0.507, assuming all CYS residues are reduced |
| Aromaticity: | 0.065 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 55.97 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.34, 25.62, 27.42] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 94.0226 |
| Grand average of hydropathicity (GRAVY): | -0.22 |