Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4143 |
| Number of amino acids: | 373 |
| Molecular Weight: | 37821.44 Da |
| Theoretical pI: | 9.45 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 100 | 26.81% |
| Cysteine CYS (C) | 0 | 0% |
| Glutamic Acid GLU (E) | 19 | 5.09% |
| Aspartic Acid ASP (D) | 12 | 3.22% |
| Glycine GLY (G) | 21 | 5.63% |
| Phynylalanine PHE (F) | 19 | 5.09% |
| Isoleucine ILE (I) | 10 | 2.68% |
| Histidine HIS (H) | 1 | 0.27% |
| Lysine LYS (K) | 42 | 11.26% |
| Methionine MET (M) | 3 | 0.8% |
| Leucine LEU (L) | 20 | 5.36% |
| Asparagine ASN (N) | 7 | 1.88% |
| Glutamine GLN (Q) | 8 | 2.14% |
| Proline PRO (P) | 21 | 5.63% |
| Serine SER (S) | 19 | 5.09% |
| Arginine ARG (R) | 2 | 0.54% |
| Threonine THR (T) | 28 | 7.51% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 28 | 7.51% |
| Tyrosine TYR (Y) | 13 | 3.49% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1720 |
| Hydrogen | H | 2734 |
| Nitrogen | N | 438 |
| Oxygen | O | 511 |
| Sulphur | S | 3 |
| Formula | C1720H2734N438O511S3 |
| Total Number of Atoms: | 5406 |
| Total number of positively charged residues (ARG + LYS): | 44 |
| Total number of negatively charged residues (ASP + GLU): | 31 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 19370 Absorption 0.1% (=1 g/l) 0.512 |
| Aromaticity: | 0.086 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 28.22 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [24.13, 18.23, 38.07] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.9464 |
| Grand average of hydropathicity (GRAVY): | 0.12 |