Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4138 |
| Number of amino acids: | 663 |
| Molecular Weight: | 73156.86 Da |
| Theoretical pI: | 5.13 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 52 | 7.84% |
| Cysteine CYS (C) | 3 | 0.45% |
| Glutamic Acid GLU (E) | 62 | 9.35% |
| Aspartic Acid ASP (D) | 51 | 7.69% |
| Glycine GLY (G) | 58 | 8.75% |
| Phynylalanine PHE (F) | 24 | 3.62% |
| Isoleucine ILE (I) | 44 | 6.64% |
| Histidine HIS (H) | 5 | 0.75% |
| Lysine LYS (K) | 63 | 9.5% |
| Methionine MET (M) | 11 | 1.66% |
| Leucine LEU (L) | 51 | 7.69% |
| Asparagine ASN (N) | 31 | 4.68% |
| Glutamine GLN (Q) | 24 | 3.62% |
| Proline PRO (P) | 20 | 3.02% |
| Serine SER (S) | 27 | 4.07% |
| Arginine ARG (R) | 31 | 4.68% |
| Threonine THR (T) | 37 | 5.58% |
| Tryptophan TRP (W) | 2 | 0.3% |
| Valine VAL (V) | 52 | 7.84% |
| Tyrosine TYR (Y) | 15 | 2.26% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3220 |
| Hydrogen | H | 5198 |
| Nitrogen | N | 886 |
| Oxygen | O | 1024 |
| Sulphur | S | 14 |
| Formula | C3220H5198N886O1024S14 |
| Total Number of Atoms: | 10342 |
| Total number of positively charged residues (ARG + LYS): | 94 |
| Total number of negatively charged residues (ASP + GLU): | 113 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 33475 Absorption 0.1% (=1 g/l) 0.458, assuming all pairs of CYS residues form cystines Ext. coefficient 33350 Absorption 0.1% (=1 g/l) 0.456, assuming all CYS residues are reduced |
| Aromaticity: | 0.062 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 25.07 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.36, 20.51, 26.55] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 86.4706 |
| Grand average of hydropathicity (GRAVY): | -0.47 |