Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4133 |
| Number of amino acids: | 284 |
| Molecular Weight: | 32572.84 Da |
| Theoretical pI: | 8.29 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 13 | 4.58% |
| Cysteine CYS (C) | 4 | 1.41% |
| Glutamic Acid GLU (E) | 9 | 3.17% |
| Aspartic Acid ASP (D) | 21 | 7.39% |
| Glycine GLY (G) | 22 | 7.75% |
| Phynylalanine PHE (F) | 20 | 7.04% |
| Isoleucine ILE (I) | 8 | 2.82% |
| Histidine HIS (H) | 7 | 2.46% |
| Lysine LYS (K) | 16 | 5.63% |
| Methionine MET (M) | 8 | 2.82% |
| Leucine LEU (L) | 25 | 8.8% |
| Asparagine ASN (N) | 10 | 3.52% |
| Glutamine GLN (Q) | 12 | 4.23% |
| Proline PRO (P) | 13 | 4.58% |
| Serine SER (S) | 20 | 7.04% |
| Arginine ARG (R) | 16 | 5.63% |
| Threonine THR (T) | 26 | 9.15% |
| Tryptophan TRP (W) | 8 | 2.82% |
| Valine VAL (V) | 14 | 4.93% |
| Tyrosine TYR (Y) | 12 | 4.23% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1471 |
| Hydrogen | H | 2212 |
| Nitrogen | N | 392 |
| Oxygen | O | 425 |
| Sulphur | S | 12 |
| Formula | C1471H2212N392O425S12 |
| Total Number of Atoms: | 4512 |
| Total number of positively charged residues (ARG + LYS): | 32 |
| Total number of negatively charged residues (ASP + GLU): | 30 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 62130 Absorption 0.1% (=1 g/l) 1.907, assuming all pairs of CYS residues form cystines Ext. coefficient 61880 Absorption 0.1% (=1 g/l) 1.900, assuming all CYS residues are reduced |
| Aromaticity: | 0.141 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.49 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.63, 22.89, 19.37] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 64.1901 |
| Grand average of hydropathicity (GRAVY): | -0.46 |