Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4132 |
| Number of amino acids: | 456 |
| Molecular Weight: | 48037.21 Da |
| Theoretical pI: | 5.29 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 62 | 13.6% |
| Cysteine CYS (C) | 4 | 0.88% |
| Glutamic Acid GLU (E) | 32 | 7.02% |
| Aspartic Acid ASP (D) | 33 | 7.24% |
| Glycine GLY (G) | 50 | 10.96% |
| Phynylalanine PHE (F) | 9 | 1.97% |
| Isoleucine ILE (I) | 11 | 2.41% |
| Histidine HIS (H) | 5 | 1.1% |
| Lysine LYS (K) | 19 | 4.17% |
| Methionine MET (M) | 14 | 3.07% |
| Leucine LEU (L) | 48 | 10.53% |
| Asparagine ASN (N) | 7 | 1.54% |
| Glutamine GLN (Q) | 15 | 3.29% |
| Proline PRO (P) | 27 | 5.92% |
| Serine SER (S) | 34 | 7.46% |
| Arginine ARG (R) | 36 | 7.89% |
| Threonine THR (T) | 18 | 3.95% |
| Tryptophan TRP (W) | 4 | 0.88% |
| Valine VAL (V) | 25 | 5.48% |
| Tyrosine TYR (Y) | 3 | 0.66% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2063 |
| Hydrogen | H | 3361 |
| Nitrogen | N | 619 |
| Oxygen | O | 664 |
| Sulphur | S | 18 |
| Formula | C2063H3361N619O664S18 |
| Total Number of Atoms: | 6725 |
| Total number of positively charged residues (ARG + LYS): | 55 |
| Total number of negatively charged residues (ASP + GLU): | 65 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 26720 Absorption 0.1% (=1 g/l) 0.556, assuming all pairs of CYS residues form cystines Ext. coefficient 26470 Absorption 0.1% (=1 g/l) 0.551, assuming all CYS residues are reduced |
| Aromaticity: | 0.035 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 55.34 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [21.93, 25.88, 34.21] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.9561 |
| Grand average of hydropathicity (GRAVY): | -0.34 |