Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4131 |
| Number of amino acids: | 348 |
| Molecular Weight: | 37186.01 Da |
| Theoretical pI: | 7.05 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 43 | 12.36% |
| Cysteine CYS (C) | 10 | 2.87% |
| Glutamic Acid GLU (E) | 8 | 2.3% |
| Aspartic Acid ASP (D) | 22 | 6.32% |
| Glycine GLY (G) | 23 | 6.61% |
| Phynylalanine PHE (F) | 20 | 5.75% |
| Isoleucine ILE (I) | 11 | 3.16% |
| Histidine HIS (H) | 4 | 1.15% |
| Lysine LYS (K) | 11 | 3.16% |
| Methionine MET (M) | 6 | 1.72% |
| Leucine LEU (L) | 35 | 10.06% |
| Asparagine ASN (N) | 22 | 6.32% |
| Glutamine GLN (Q) | 15 | 4.31% |
| Proline PRO (P) | 11 | 3.16% |
| Serine SER (S) | 29 | 8.33% |
| Arginine ARG (R) | 19 | 5.46% |
| Threonine THR (T) | 30 | 8.62% |
| Tryptophan TRP (W) | 1 | 0.29% |
| Valine VAL (V) | 23 | 6.61% |
| Tyrosine TYR (Y) | 5 | 1.44% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1619 |
| Hydrogen | H | 2576 |
| Nitrogen | N | 462 |
| Oxygen | O | 510 |
| Sulphur | S | 16 |
| Formula | C1619H2576N462O510S16 |
| Total Number of Atoms: | 5183 |
| Total number of positively charged residues (ARG + LYS): | 30 |
| Total number of negatively charged residues (ASP + GLU): | 30 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 13575 Absorption 0.1% (=1 g/l) 0.365, assuming all pairs of CYS residues form cystines Ext. coefficient 12950 Absorption 0.1% (=1 g/l) 0.348, assuming all CYS residues are reduced |
| Aromaticity: | 0.075 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 30.03 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.30, 24.43, 26.44] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.0748 |
| Grand average of hydropathicity (GRAVY): | -0.01 |