Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4129 |
| Number of amino acids: | 731 |
| Molecular Weight: | 82864.06 Da |
| Theoretical pI: | 6.86 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 40 | 5.47% |
| Cysteine CYS (C) | 13 | 1.78% |
| Glutamic Acid GLU (E) | 39 | 5.34% |
| Aspartic Acid ASP (D) | 34 | 4.65% |
| Glycine GLY (G) | 64 | 8.76% |
| Phynylalanine PHE (F) | 30 | 4.1% |
| Isoleucine ILE (I) | 32 | 4.38% |
| Histidine HIS (H) | 18 | 2.46% |
| Lysine LYS (K) | 51 | 6.98% |
| Methionine MET (M) | 20 | 2.74% |
| Leucine LEU (L) | 51 | 6.98% |
| Asparagine ASN (N) | 42 | 5.75% |
| Glutamine GLN (Q) | 28 | 3.83% |
| Proline PRO (P) | 40 | 5.47% |
| Serine SER (S) | 50 | 6.84% |
| Arginine ARG (R) | 20 | 2.74% |
| Threonine THR (T) | 38 | 5.2% |
| Tryptophan TRP (W) | 30 | 4.1% |
| Valine VAL (V) | 53 | 7.25% |
| Tyrosine TYR (Y) | 38 | 5.2% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3767 |
| Hydrogen | H | 5634 |
| Nitrogen | N | 978 |
| Oxygen | O | 1074 |
| Sulphur | S | 33 |
| Formula | C3767H5634N978O1074S33 |
| Total Number of Atoms: | 11486 |
| Total number of positively charged residues (ARG + LYS): | 71 |
| Total number of negatively charged residues (ASP + GLU): | 73 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 222370 Absorption 0.1% (=1 g/l) 2.684, assuming all pairs of CYS residues form cystines Ext. coefficient 221620 Absorption 0.1% (=1 g/l) 2.675, assuming all CYS residues are reduced |
| Aromaticity: | 0.134 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 33.91 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.01, 26.81, 20.52] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 70.7797 |
| Grand average of hydropathicity (GRAVY): | -0.40 |