Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4125 |
| Number of amino acids: | 647 |
| Molecular Weight: | 70405.68 Da |
| Theoretical pI: | 6.16 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 41 | 6.34% |
| Cysteine CYS (C) | 7 | 1.08% |
| Glutamic Acid GLU (E) | 44 | 6.8% |
| Aspartic Acid ASP (D) | 31 | 4.79% |
| Glycine GLY (G) | 55 | 8.5% |
| Phynylalanine PHE (F) | 23 | 3.55% |
| Isoleucine ILE (I) | 24 | 3.71% |
| Histidine HIS (H) | 10 | 1.55% |
| Lysine LYS (K) | 33 | 5.1% |
| Methionine MET (M) | 15 | 2.32% |
| Leucine LEU (L) | 87 | 13.45% |
| Asparagine ASN (N) | 32 | 4.95% |
| Glutamine GLN (Q) | 13 | 2.01% |
| Proline PRO (P) | 27 | 4.17% |
| Serine SER (S) | 65 | 10.05% |
| Arginine ARG (R) | 37 | 5.72% |
| Threonine THR (T) | 29 | 4.48% |
| Tryptophan TRP (W) | 5 | 0.77% |
| Valine VAL (V) | 57 | 8.81% |
| Tyrosine TYR (Y) | 12 | 1.85% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3113 |
| Hydrogen | H | 5027 |
| Nitrogen | N | 861 |
| Oxygen | O | 949 |
| Sulphur | S | 22 |
| Formula | C3113H5027N861O949S22 |
| Total Number of Atoms: | 9972 |
| Total number of positively charged residues (ARG + LYS): | 70 |
| Total number of negatively charged residues (ASP + GLU): | 75 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 45755 Absorption 0.1% (=1 g/l) 0.650, assuming all pairs of CYS residues form cystines Ext. coefficient 45380 Absorption 0.1% (=1 g/l) 0.645, assuming all CYS residues are reduced |
| Aromaticity: | 0.062 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.10 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.15, 27.67, 28.90] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 98.7945 |
| Grand average of hydropathicity (GRAVY): | -0.07 |