Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4110 |
| Number of amino acids: | 686 |
| Molecular Weight: | 76354.32 Da |
| Theoretical pI: | 8.08 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 30 | 4.37% |
| Cysteine CYS (C) | 15 | 2.19% |
| Glutamic Acid GLU (E) | 35 | 5.1% |
| Aspartic Acid ASP (D) | 32 | 4.66% |
| Glycine GLY (G) | 49 | 7.14% |
| Phynylalanine PHE (F) | 41 | 5.98% |
| Isoleucine ILE (I) | 45 | 6.56% |
| Histidine HIS (H) | 9 | 1.31% |
| Lysine LYS (K) | 39 | 5.69% |
| Methionine MET (M) | 14 | 2.04% |
| Leucine LEU (L) | 59 | 8.6% |
| Asparagine ASN (N) | 45 | 6.56% |
| Glutamine GLN (Q) | 26 | 3.79% |
| Proline PRO (P) | 34 | 4.96% |
| Serine SER (S) | 62 | 9.04% |
| Arginine ARG (R) | 31 | 4.52% |
| Threonine THR (T) | 40 | 5.83% |
| Tryptophan TRP (W) | 6 | 0.87% |
| Valine VAL (V) | 54 | 7.87% |
| Tyrosine TYR (Y) | 20 | 2.92% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3415 |
| Hydrogen | H | 5353 |
| Nitrogen | N | 913 |
| Oxygen | O | 1014 |
| Sulphur | S | 29 |
| Formula | C3415H5353N913O1014S29 |
| Total Number of Atoms: | 10724 |
| Total number of positively charged residues (ARG + LYS): | 70 |
| Total number of negatively charged residues (ASP + GLU): | 67 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 63675 Absorption 0.1% (=1 g/l) 0.834, assuming all pairs of CYS residues form cystines Ext. coefficient 62800 Absorption 0.1% (=1 g/l) 0.822, assuming all CYS residues are reduced |
| Aromaticity: | 0.098 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 46.48 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.80, 27.70, 20.12] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 86.3265 |
| Grand average of hydropathicity (GRAVY): | -0.15 |