Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4108 |
| Number of amino acids: | 735 |
| Molecular Weight: | 81211.03 Da |
| Theoretical pI: | 5.46 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 38 | 5.17% |
| Cysteine CYS (C) | 30 | 4.08% |
| Glutamic Acid GLU (E) | 53 | 7.21% |
| Aspartic Acid ASP (D) | 37 | 5.03% |
| Glycine GLY (G) | 59 | 8.03% |
| Phynylalanine PHE (F) | 29 | 3.95% |
| Isoleucine ILE (I) | 41 | 5.58% |
| Histidine HIS (H) | 18 | 2.45% |
| Lysine LYS (K) | 40 | 5.44% |
| Methionine MET (M) | 15 | 2.04% |
| Leucine LEU (L) | 74 | 10.07% |
| Asparagine ASN (N) | 41 | 5.58% |
| Glutamine GLN (Q) | 29 | 3.95% |
| Proline PRO (P) | 21 | 2.86% |
| Serine SER (S) | 61 | 8.3% |
| Arginine ARG (R) | 30 | 4.08% |
| Threonine THR (T) | 51 | 6.94% |
| Tryptophan TRP (W) | 4 | 0.54% |
| Valine VAL (V) | 42 | 5.71% |
| Tyrosine TYR (Y) | 22 | 2.99% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3542 |
| Hydrogen | H | 5605 |
| Nitrogen | N | 975 |
| Oxygen | O | 1120 |
| Sulphur | S | 45 |
| Formula | C3542H5605N975O1120S45 |
| Total Number of Atoms: | 11287 |
| Total number of positively charged residues (ARG + LYS): | 70 |
| Total number of negatively charged residues (ASP + GLU): | 90 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 56655 Absorption 0.1% (=1 g/l) 0.698, assuming all pairs of CYS residues form cystines Ext. coefficient 54780 Absorption 0.1% (=1 g/l) 0.675, assuming all CYS residues are reduced |
| Aromaticity: | 0.075 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 39.06 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.84, 24.76, 24.49] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.7618 |
| Grand average of hydropathicity (GRAVY): | -0.26 |