Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4105 |
| Number of amino acids: | 420 |
| Molecular Weight: | 43074.83 Da |
| Theoretical pI: | 5.44 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 51 | 12.14% |
| Cysteine CYS (C) | 2 | 0.48% |
| Glutamic Acid GLU (E) | 15 | 3.57% |
| Aspartic Acid ASP (D) | 18 | 4.29% |
| Glycine GLY (G) | 25 | 5.95% |
| Phynylalanine PHE (F) | 14 | 3.33% |
| Isoleucine ILE (I) | 19 | 4.52% |
| Histidine HIS (H) | 5 | 1.19% |
| Lysine LYS (K) | 25 | 5.95% |
| Methionine MET (M) | 2 | 0.48% |
| Leucine LEU (L) | 48 | 11.43% |
| Asparagine ASN (N) | 18 | 4.29% |
| Glutamine GLN (Q) | 7 | 1.67% |
| Proline PRO (P) | 33 | 7.86% |
| Serine SER (S) | 56 | 13.33% |
| Arginine ARG (R) | 2 | 0.48% |
| Threonine THR (T) | 41 | 9.76% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 29 | 6.9% |
| Tyrosine TYR (Y) | 10 | 2.38% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1925 |
| Hydrogen | H | 3090 |
| Nitrogen | N | 486 |
| Oxygen | O | 619 |
| Sulphur | S | 4 |
| Formula | C1925H3090N486O619S4 |
| Total Number of Atoms: | 6124 |
| Total number of positively charged residues (ARG + LYS): | 27 |
| Total number of negatively charged residues (ASP + GLU): | 33 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 15025 Absorption 0.1% (=1 g/l) 0.349, assuming all pairs of CYS residues form cystines Ext. coefficient 14900 Absorption 0.1% (=1 g/l) 0.346, assuming all CYS residues are reduced |
| Aromaticity: | 0.057 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 43.68 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.57, 31.43, 27.62] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 94.3811 |
| Grand average of hydropathicity (GRAVY): | 0.13 |