Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4102 |
| Number of amino acids: | 276 |
| Molecular Weight: | 29761.59 Da |
| Theoretical pI: | 8.59 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 25 | 9.06% |
| Cysteine CYS (C) | 8 | 2.9% |
| Glutamic Acid GLU (E) | 10 | 3.62% |
| Aspartic Acid ASP (D) | 13 | 4.71% |
| Glycine GLY (G) | 37 | 13.41% |
| Phynylalanine PHE (F) | 11 | 3.99% |
| Isoleucine ILE (I) | 8 | 2.9% |
| Histidine HIS (H) | 3 | 1.09% |
| Lysine LYS (K) | 10 | 3.62% |
| Methionine MET (M) | 5 | 1.81% |
| Leucine LEU (L) | 17 | 6.16% |
| Asparagine ASN (N) | 14 | 5.07% |
| Glutamine GLN (Q) | 10 | 3.62% |
| Proline PRO (P) | 14 | 5.07% |
| Serine SER (S) | 20 | 7.25% |
| Arginine ARG (R) | 17 | 6.16% |
| Threonine THR (T) | 8 | 2.9% |
| Tryptophan TRP (W) | 7 | 2.54% |
| Valine VAL (V) | 26 | 9.42% |
| Tyrosine TYR (Y) | 13 | 4.71% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1321 |
| Hydrogen | H | 2016 |
| Nitrogen | N | 374 |
| Oxygen | O | 388 |
| Sulphur | S | 13 |
| Formula | C1321H2016N374O388S13 |
| Total Number of Atoms: | 4112 |
| Total number of positively charged residues (ARG + LYS): | 27 |
| Total number of negatively charged residues (ASP + GLU): | 23 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 58370 Absorption 0.1% (=1 g/l) 1.961, assuming all pairs of CYS residues form cystines Ext. coefficient 57870 Absorption 0.1% (=1 g/l) 1.944, assuming all CYS residues are reduced |
| Aromaticity: | 0.112 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 30.56 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.71, 30.80, 20.65] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 71.7029 |
| Grand average of hydropathicity (GRAVY): | -0.20 |