Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4100 |
| Number of amino acids: | 182 |
| Molecular Weight: | 17971.68 Da |
| Theoretical pI: | 6.54 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 26 | 14.29% |
| Cysteine CYS (C) | 8 | 4.4% |
| Glutamic Acid GLU (E) | 3 | 1.65% |
| Aspartic Acid ASP (D) | 4 | 2.2% |
| Glycine GLY (G) | 13 | 7.14% |
| Phynylalanine PHE (F) | 9 | 4.95% |
| Isoleucine ILE (I) | 5 | 2.75% |
| Histidine HIS (H) | 5 | 2.75% |
| Lysine LYS (K) | 6 | 3.3% |
| Methionine MET (M) | 2 | 1.1% |
| Leucine LEU (L) | 23 | 12.64% |
| Asparagine ASN (N) | 4 | 2.2% |
| Glutamine GLN (Q) | 1 | 0.55% |
| Proline PRO (P) | 13 | 7.14% |
| Serine SER (S) | 29 | 15.93% |
| Arginine ARG (R) | 0 | 0% |
| Threonine THR (T) | 18 | 9.89% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 13 | 7.14% |
| Tyrosine TYR (Y) | 0 | 0% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 794 |
| Hydrogen | H | 1277 |
| Nitrogen | N | 203 |
| Oxygen | O | 249 |
| Sulphur | S | 10 |
| Formula | C794H1277N203O249S10 |
| Total Number of Atoms: | 2533 |
| Total number of positively charged residues (ARG + LYS): | 6 |
| Total number of negatively charged residues (ASP + GLU): | 7 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 500 Absorption 0.1% (=1 g/l) 0.028, assuming all pairs of CYS residues form cystines Ext. coefficient 0 Absorption 0.1% (=1 g/l) 0.000, assuming all CYS residues are reduced |
| Aromaticity: | 0.049 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.21 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.47, 32.42, 29.67] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 95.0001 |
| Grand average of hydropathicity (GRAVY): | 0.64 |