Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4099 |
| Number of amino acids: | 431 |
| Molecular Weight: | 47770.79 Da |
| Theoretical pI: | 8.07 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 34 | 7.89% |
| Cysteine CYS (C) | 11 | 2.55% |
| Glutamic Acid GLU (E) | 13 | 3.02% |
| Aspartic Acid ASP (D) | 27 | 6.26% |
| Glycine GLY (G) | 37 | 8.58% |
| Phynylalanine PHE (F) | 14 | 3.25% |
| Isoleucine ILE (I) | 24 | 5.57% |
| Histidine HIS (H) | 23 | 5.34% |
| Lysine LYS (K) | 13 | 3.02% |
| Methionine MET (M) | 14 | 3.25% |
| Leucine LEU (L) | 26 | 6.03% |
| Asparagine ASN (N) | 29 | 6.73% |
| Glutamine GLN (Q) | 10 | 2.32% |
| Proline PRO (P) | 17 | 3.94% |
| Serine SER (S) | 33 | 7.66% |
| Arginine ARG (R) | 29 | 6.73% |
| Threonine THR (T) | 27 | 6.26% |
| Tryptophan TRP (W) | 11 | 2.55% |
| Valine VAL (V) | 29 | 6.73% |
| Tyrosine TYR (Y) | 10 | 2.32% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2082 |
| Hydrogen | H | 3219 |
| Nitrogen | N | 627 |
| Oxygen | O | 621 |
| Sulphur | S | 25 |
| Formula | C2082H3219N627O621S25 |
| Total Number of Atoms: | 6574 |
| Total number of positively charged residues (ARG + LYS): | 42 |
| Total number of negatively charged residues (ASP + GLU): | 40 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 76025 Absorption 0.1% (=1 g/l) 1.591, assuming all pairs of CYS residues form cystines Ext. coefficient 75400 Absorption 0.1% (=1 g/l) 1.578, assuming all CYS residues are reduced |
| Aromaticity: | 0.081 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 34.91 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.45, 26.91, 20.19] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 72.645 |
| Grand average of hydropathicity (GRAVY): | -0.37 |