Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4098 |
| Number of amino acids: | 444 |
| Molecular Weight: | 49222.21 Da |
| Theoretical pI: | 5.38 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 34 | 7.66% |
| Cysteine CYS (C) | 3 | 0.68% |
| Glutamic Acid GLU (E) | 30 | 6.76% |
| Aspartic Acid ASP (D) | 19 | 4.28% |
| Glycine GLY (G) | 35 | 7.88% |
| Phynylalanine PHE (F) | 16 | 3.6% |
| Isoleucine ILE (I) | 12 | 2.7% |
| Histidine HIS (H) | 5 | 1.13% |
| Lysine LYS (K) | 20 | 4.5% |
| Methionine MET (M) | 11 | 2.48% |
| Leucine LEU (L) | 49 | 11.04% |
| Asparagine ASN (N) | 18 | 4.05% |
| Glutamine GLN (Q) | 20 | 4.5% |
| Proline PRO (P) | 24 | 5.41% |
| Serine SER (S) | 28 | 6.31% |
| Arginine ARG (R) | 21 | 4.73% |
| Threonine THR (T) | 28 | 6.31% |
| Tryptophan TRP (W) | 9 | 2.03% |
| Valine VAL (V) | 44 | 9.91% |
| Tyrosine TYR (Y) | 18 | 4.05% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2217 |
| Hydrogen | H | 3458 |
| Nitrogen | N | 584 |
| Oxygen | O | 655 |
| Sulphur | S | 14 |
| Formula | C2217H3458N584O655S14 |
| Total Number of Atoms: | 6928 |
| Total number of positively charged residues (ARG + LYS): | 41 |
| Total number of negatively charged residues (ASP + GLU): | 49 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 76445 Absorption 0.1% (=1 g/l) 1.553, assuming all pairs of CYS residues form cystines Ext. coefficient 76320 Absorption 0.1% (=1 g/l) 1.551, assuming all CYS residues are reduced |
| Aromaticity: | 0.097 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 35.91 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.33, 23.65, 27.93] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 89.9773 |
| Grand average of hydropathicity (GRAVY): | -0.13 |