Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4094 |
| Number of amino acids: | 212 |
| Molecular Weight: | 21238.87 Da |
| Theoretical pI: | 7.66 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 24 | 11.32% |
| Cysteine CYS (C) | 32 | 15.09% |
| Glutamic Acid GLU (E) | 6 | 2.83% |
| Aspartic Acid ASP (D) | 5 | 2.36% |
| Glycine GLY (G) | 42 | 19.81% |
| Phynylalanine PHE (F) | 5 | 2.36% |
| Isoleucine ILE (I) | 3 | 1.42% |
| Histidine HIS (H) | 0 | 0% |
| Lysine LYS (K) | 8 | 3.77% |
| Methionine MET (M) | 5 | 2.36% |
| Leucine LEU (L) | 9 | 4.25% |
| Asparagine ASN (N) | 11 | 5.19% |
| Glutamine GLN (Q) | 14 | 6.6% |
| Proline PRO (P) | 5 | 2.36% |
| Serine SER (S) | 15 | 7.08% |
| Arginine ARG (R) | 5 | 2.36% |
| Threonine THR (T) | 9 | 4.25% |
| Tryptophan TRP (W) | 3 | 1.42% |
| Valine VAL (V) | 3 | 1.42% |
| Tyrosine TYR (Y) | 8 | 3.77% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 862 |
| Hydrogen | H | 1333 |
| Nitrogen | N | 263 |
| Oxygen | O | 292 |
| Sulphur | S | 37 |
| Formula | C862H1333N263O292S37 |
| Total Number of Atoms: | 2787 |
| Total number of positively charged residues (ARG + LYS): | 13 |
| Total number of negatively charged residues (ASP + GLU): | 11 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 30420 Absorption 0.1% (=1 g/l) 1.432, assuming all pairs of CYS residues form cystines Ext. coefficient 28420 Absorption 0.1% (=1 g/l) 1.338, assuming all CYS residues are reduced |
| Aromaticity: | 0.075 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 33.27 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [14.62, 34.43, 20.75] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 37.5 |
| Grand average of hydropathicity (GRAVY): | -0.14 |