Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4093 |
| Number of amino acids: | 212 |
| Molecular Weight: | 21208.94 Da |
| Theoretical pI: | 7.87 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 26 | 12.26% |
| Cysteine CYS (C) | 32 | 15.09% |
| Glutamic Acid GLU (E) | 7 | 3.3% |
| Aspartic Acid ASP (D) | 4 | 1.89% |
| Glycine GLY (G) | 42 | 19.81% |
| Phynylalanine PHE (F) | 4 | 1.89% |
| Isoleucine ILE (I) | 3 | 1.42% |
| Histidine HIS (H) | 2 | 0.94% |
| Lysine LYS (K) | 10 | 4.72% |
| Methionine MET (M) | 5 | 2.36% |
| Leucine LEU (L) | 8 | 3.77% |
| Asparagine ASN (N) | 11 | 5.19% |
| Glutamine GLN (Q) | 11 | 5.19% |
| Proline PRO (P) | 6 | 2.83% |
| Serine SER (S) | 13 | 6.13% |
| Arginine ARG (R) | 4 | 1.89% |
| Threonine THR (T) | 8 | 3.77% |
| Tryptophan TRP (W) | 3 | 1.42% |
| Valine VAL (V) | 4 | 1.89% |
| Tyrosine TYR (Y) | 9 | 4.25% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 866 |
| Hydrogen | H | 1335 |
| Nitrogen | N | 263 |
| Oxygen | O | 287 |
| Sulphur | S | 37 |
| Formula | C866H1335N263O287S37 |
| Total Number of Atoms: | 2788 |
| Total number of positively charged residues (ARG + LYS): | 14 |
| Total number of negatively charged residues (ASP + GLU): | 11 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 31910 Absorption 0.1% (=1 g/l) 1.505, assuming all pairs of CYS residues form cystines Ext. coefficient 29910 Absorption 0.1% (=1 g/l) 1.410, assuming all CYS residues are reduced |
| Aromaticity: | 0.075 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 24.80 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [14.62, 33.96, 21.70] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 37.9717 |
| Grand average of hydropathicity (GRAVY): | -0.13 |