Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4092 |
| Number of amino acids: | 661 |
| Molecular Weight: | 72601.72 Da |
| Theoretical pI: | 7.81 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 42 | 6.35% |
| Cysteine CYS (C) | 20 | 3.03% |
| Glutamic Acid GLU (E) | 18 | 2.72% |
| Aspartic Acid ASP (D) | 39 | 5.9% |
| Glycine GLY (G) | 38 | 5.75% |
| Phynylalanine PHE (F) | 30 | 4.54% |
| Isoleucine ILE (I) | 30 | 4.54% |
| Histidine HIS (H) | 8 | 1.21% |
| Lysine LYS (K) | 30 | 4.54% |
| Methionine MET (M) | 15 | 2.27% |
| Leucine LEU (L) | 54 | 8.17% |
| Asparagine ASN (N) | 44 | 6.66% |
| Glutamine GLN (Q) | 24 | 3.63% |
| Proline PRO (P) | 60 | 9.08% |
| Serine SER (S) | 63 | 9.53% |
| Arginine ARG (R) | 29 | 4.39% |
| Threonine THR (T) | 39 | 5.9% |
| Tryptophan TRP (W) | 11 | 1.66% |
| Valine VAL (V) | 49 | 7.41% |
| Tyrosine TYR (Y) | 18 | 2.72% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3228 |
| Hydrogen | H | 5017 |
| Nitrogen | N | 873 |
| Oxygen | O | 964 |
| Sulphur | S | 35 |
| Formula | C3228H5017N873O964S35 |
| Total Number of Atoms: | 10117 |
| Total number of positively charged residues (ARG + LYS): | 59 |
| Total number of negatively charged residues (ASP + GLU): | 57 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 88570 Absorption 0.1% (=1 g/l) 1.220, assuming all pairs of CYS residues form cystines Ext. coefficient 87320 Absorption 0.1% (=1 g/l) 1.203, assuming all CYS residues are reduced |
| Aromaticity: | 0.089 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.93 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.05, 31.01, 19.52] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 77.413 |
| Grand average of hydropathicity (GRAVY): | -0.23 |