Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4090 |
| Number of amino acids: | 929 |
| Molecular Weight: | 100989.68 Da |
| Theoretical pI: | 8.11 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 67 | 7.21% |
| Cysteine CYS (C) | 12 | 1.29% |
| Glutamic Acid GLU (E) | 51 | 5.49% |
| Aspartic Acid ASP (D) | 54 | 5.81% |
| Glycine GLY (G) | 52 | 5.6% |
| Phynylalanine PHE (F) | 27 | 2.91% |
| Isoleucine ILE (I) | 34 | 3.66% |
| Histidine HIS (H) | 18 | 1.94% |
| Lysine LYS (K) | 69 | 7.43% |
| Methionine MET (M) | 28 | 3.01% |
| Leucine LEU (L) | 100 | 10.76% |
| Asparagine ASN (N) | 47 | 5.06% |
| Glutamine GLN (Q) | 37 | 3.98% |
| Proline PRO (P) | 82 | 8.83% |
| Serine SER (S) | 93 | 10.01% |
| Arginine ARG (R) | 39 | 4.2% |
| Threonine THR (T) | 41 | 4.41% |
| Tryptophan TRP (W) | 5 | 0.54% |
| Valine VAL (V) | 65 | 7% |
| Tyrosine TYR (Y) | 8 | 0.86% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 4433 |
| Hydrogen | H | 7182 |
| Nitrogen | N | 1240 |
| Oxygen | O | 1366 |
| Sulphur | S | 40 |
| Formula | C4433H7182N1240O1366S40 |
| Total Number of Atoms: | 14261 |
| Total number of positively charged residues (ARG + LYS): | 108 |
| Total number of negatively charged residues (ASP + GLU): | 105 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 40170 Absorption 0.1% (=1 g/l) 0.398, assuming all pairs of CYS residues form cystines Ext. coefficient 39420 Absorption 0.1% (=1 g/l) 0.390, assuming all CYS residues are reduced |
| Aromaticity: | 0.043 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 49.17 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.73, 29.49, 26.48] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.7569 |
| Grand average of hydropathicity (GRAVY): | -0.38 |