Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4074 |
| Number of amino acids: | 656 |
| Molecular Weight: | 73695.43 Da |
| Theoretical pI: | 8.4 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 24 | 3.66% |
| Cysteine CYS (C) | 19 | 2.9% |
| Glutamic Acid GLU (E) | 24 | 3.66% |
| Aspartic Acid ASP (D) | 43 | 6.55% |
| Glycine GLY (G) | 47 | 7.16% |
| Phynylalanine PHE (F) | 33 | 5.03% |
| Isoleucine ILE (I) | 44 | 6.71% |
| Histidine HIS (H) | 8 | 1.22% |
| Lysine LYS (K) | 32 | 4.88% |
| Methionine MET (M) | 18 | 2.74% |
| Leucine LEU (L) | 60 | 9.15% |
| Asparagine ASN (N) | 36 | 5.49% |
| Glutamine GLN (Q) | 24 | 3.66% |
| Proline PRO (P) | 32 | 4.88% |
| Serine SER (S) | 57 | 8.69% |
| Arginine ARG (R) | 41 | 6.25% |
| Threonine THR (T) | 40 | 6.1% |
| Tryptophan TRP (W) | 6 | 0.91% |
| Valine VAL (V) | 44 | 6.71% |
| Tyrosine TYR (Y) | 24 | 3.66% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3269 |
| Hydrogen | H | 5145 |
| Nitrogen | N | 893 |
| Oxygen | O | 972 |
| Sulphur | S | 37 |
| Formula | C3269H5145N893O972S37 |
| Total Number of Atoms: | 10316 |
| Total number of positively charged residues (ARG + LYS): | 73 |
| Total number of negatively charged residues (ASP + GLU): | 67 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 69885 Absorption 0.1% (=1 g/l) 0.948, assuming all pairs of CYS residues form cystines Ext. coefficient 68760 Absorption 0.1% (=1 g/l) 0.933, assuming all CYS residues are reduced |
| Aromaticity: | 0.096 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 45.45 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.16, 26.22, 19.21] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 84.939 |
| Grand average of hydropathicity (GRAVY): | -0.20 |