Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4070 |
| Number of amino acids: | 508 |
| Molecular Weight: | 55330.6 Da |
| Theoretical pI: | 7.78 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 67 | 13.19% |
| Cysteine CYS (C) | 7 | 1.38% |
| Glutamic Acid GLU (E) | 18 | 3.54% |
| Aspartic Acid ASP (D) | 33 | 6.5% |
| Glycine GLY (G) | 43 | 8.46% |
| Phynylalanine PHE (F) | 22 | 4.33% |
| Isoleucine ILE (I) | 14 | 2.76% |
| Histidine HIS (H) | 16 | 3.15% |
| Lysine LYS (K) | 19 | 3.74% |
| Methionine MET (M) | 11 | 2.17% |
| Leucine LEU (L) | 43 | 8.46% |
| Asparagine ASN (N) | 16 | 3.15% |
| Glutamine GLN (Q) | 12 | 2.36% |
| Proline PRO (P) | 29 | 5.71% |
| Serine SER (S) | 41 | 8.07% |
| Arginine ARG (R) | 33 | 6.5% |
| Threonine THR (T) | 14 | 2.76% |
| Tryptophan TRP (W) | 8 | 1.57% |
| Valine VAL (V) | 38 | 7.48% |
| Tyrosine TYR (Y) | 24 | 4.72% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2475 |
| Hydrogen | H | 3788 |
| Nitrogen | N | 694 |
| Oxygen | O | 718 |
| Sulphur | S | 18 |
| Formula | C2475H3788N694O718S18 |
| Total Number of Atoms: | 7693 |
| Total number of positively charged residues (ARG + LYS): | 52 |
| Total number of negatively charged residues (ASP + GLU): | 51 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 80135 Absorption 0.1% (=1 g/l) 1.448, assuming all pairs of CYS residues form cystines Ext. coefficient 79760 Absorption 0.1% (=1 g/l) 1.442, assuming all CYS residues are reduced |
| Aromaticity: | 0.106 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.50 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.33, 25.39, 27.36] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 78.6418 |
| Grand average of hydropathicity (GRAVY): | -0.17 |