Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4068 |
| Number of amino acids: | 570 |
| Molecular Weight: | 63559.09 Da |
| Theoretical pI: | 9.61 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 32 | 5.61% |
| Cysteine CYS (C) | 4 | 0.7% |
| Glutamic Acid GLU (E) | 23 | 4.04% |
| Aspartic Acid ASP (D) | 27 | 4.74% |
| Glycine GLY (G) | 46 | 8.07% |
| Phynylalanine PHE (F) | 38 | 6.67% |
| Isoleucine ILE (I) | 24 | 4.21% |
| Histidine HIS (H) | 8 | 1.4% |
| Lysine LYS (K) | 44 | 7.72% |
| Methionine MET (M) | 13 | 2.28% |
| Leucine LEU (L) | 44 | 7.72% |
| Asparagine ASN (N) | 30 | 5.26% |
| Glutamine GLN (Q) | 12 | 2.11% |
| Proline PRO (P) | 27 | 4.74% |
| Serine SER (S) | 52 | 9.12% |
| Arginine ARG (R) | 29 | 5.09% |
| Threonine THR (T) | 28 | 4.91% |
| Tryptophan TRP (W) | 9 | 1.58% |
| Valine VAL (V) | 59 | 10.35% |
| Tyrosine TYR (Y) | 21 | 3.68% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2890 |
| Hydrogen | H | 4486 |
| Nitrogen | N | 768 |
| Oxygen | O | 814 |
| Sulphur | S | 17 |
| Formula | C2890H4486N768O814S17 |
| Total Number of Atoms: | 8975 |
| Total number of positively charged residues (ARG + LYS): | 73 |
| Total number of negatively charged residues (ASP + GLU): | 50 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 81040 Absorption 0.1% (=1 g/l) 1.275, assuming all pairs of CYS residues form cystines Ext. coefficient 80790 Absorption 0.1% (=1 g/l) 1.271, assuming all CYS residues are reduced |
| Aromaticity: | 0.119 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 27.88 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.21, 27.19, 19.65] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.158 |
| Grand average of hydropathicity (GRAVY): | -0.15 |