Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4064 |
| Number of amino acids: | 189 |
| Molecular Weight: | 19318.69 Da |
| Theoretical pI: | 6.3 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 19 | 10.05% |
| Cysteine CYS (C) | 4 | 2.12% |
| Glutamic Acid GLU (E) | 3 | 1.59% |
| Aspartic Acid ASP (D) | 9 | 4.76% |
| Glycine GLY (G) | 17 | 8.99% |
| Phynylalanine PHE (F) | 7 | 3.7% |
| Isoleucine ILE (I) | 9 | 4.76% |
| Histidine HIS (H) | 3 | 1.59% |
| Lysine LYS (K) | 11 | 5.82% |
| Methionine MET (M) | 3 | 1.59% |
| Leucine LEU (L) | 12 | 6.35% |
| Asparagine ASN (N) | 5 | 2.65% |
| Glutamine GLN (Q) | 1 | 0.53% |
| Proline PRO (P) | 9 | 4.76% |
| Serine SER (S) | 31 | 16.4% |
| Arginine ARG (R) | 0 | 0% |
| Threonine THR (T) | 23 | 12.17% |
| Tryptophan TRP (W) | 3 | 1.59% |
| Valine VAL (V) | 14 | 7.41% |
| Tyrosine TYR (Y) | 6 | 3.17% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 854 |
| Hydrogen | H | 1335 |
| Nitrogen | N | 215 |
| Oxygen | O | 280 |
| Sulphur | S | 7 |
| Formula | C854H1335N215O280S7 |
| Total Number of Atoms: | 2691 |
| Total number of positively charged residues (ARG + LYS): | 11 |
| Total number of negatively charged residues (ASP + GLU): | 12 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 25690 Absorption 0.1% (=1 g/l) 1.330, assuming all pairs of CYS residues form cystines Ext. coefficient 25440 Absorption 0.1% (=1 g/l) 1.317, assuming all CYS residues are reduced |
| Aromaticity: | 0.085 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 27.80 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.98, 32.80, 19.58] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 74.8677 |
| Grand average of hydropathicity (GRAVY): | 0.14 |