Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4055 |
| Number of amino acids: | 599 |
| Molecular Weight: | 65670.34 Da |
| Theoretical pI: | 6.27 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 65 | 10.85% |
| Cysteine CYS (C) | 7 | 1.17% |
| Glutamic Acid GLU (E) | 30 | 5.01% |
| Aspartic Acid ASP (D) | 27 | 4.51% |
| Glycine GLY (G) | 45 | 7.51% |
| Phynylalanine PHE (F) | 25 | 4.17% |
| Isoleucine ILE (I) | 26 | 4.34% |
| Histidine HIS (H) | 28 | 4.67% |
| Lysine LYS (K) | 11 | 1.84% |
| Methionine MET (M) | 15 | 2.5% |
| Leucine LEU (L) | 42 | 7.01% |
| Asparagine ASN (N) | 29 | 4.84% |
| Glutamine GLN (Q) | 17 | 2.84% |
| Proline PRO (P) | 43 | 7.18% |
| Serine SER (S) | 33 | 5.51% |
| Arginine ARG (R) | 36 | 6.01% |
| Threonine THR (T) | 37 | 6.18% |
| Tryptophan TRP (W) | 8 | 1.34% |
| Valine VAL (V) | 54 | 9.02% |
| Tyrosine TYR (Y) | 21 | 3.51% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2932 |
| Hydrogen | H | 4500 |
| Nitrogen | N | 828 |
| Oxygen | O | 851 |
| Sulphur | S | 22 |
| Formula | C2932H4500N828O851S22 |
| Total Number of Atoms: | 9133 |
| Total number of positively charged residues (ARG + LYS): | 47 |
| Total number of negatively charged residues (ASP + GLU): | 57 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 75665 Absorption 0.1% (=1 g/l) 1.152, assuming all pairs of CYS residues form cystines Ext. coefficient 75290 Absorption 0.1% (=1 g/l) 1.146, assuming all CYS residues are reduced |
| Aromaticity: | 0.090 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 39.73 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.38, 25.04, 25.38] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 81.2688 |
| Grand average of hydropathicity (GRAVY): | -0.15 |