Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4054 |
| Number of amino acids: | 731 |
| Molecular Weight: | 80995.7 Da |
| Theoretical pI: | 5.63 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 46 | 6.29% |
| Cysteine CYS (C) | 12 | 1.64% |
| Glutamic Acid GLU (E) | 39 | 5.34% |
| Aspartic Acid ASP (D) | 36 | 4.92% |
| Glycine GLY (G) | 74 | 10.12% |
| Phynylalanine PHE (F) | 33 | 4.51% |
| Isoleucine ILE (I) | 40 | 5.47% |
| Histidine HIS (H) | 14 | 1.92% |
| Lysine LYS (K) | 43 | 5.88% |
| Methionine MET (M) | 17 | 2.33% |
| Leucine LEU (L) | 54 | 7.39% |
| Asparagine ASN (N) | 29 | 3.97% |
| Glutamine GLN (Q) | 26 | 3.56% |
| Proline PRO (P) | 43 | 5.88% |
| Serine SER (S) | 58 | 7.93% |
| Arginine ARG (R) | 19 | 2.6% |
| Threonine THR (T) | 48 | 6.57% |
| Tryptophan TRP (W) | 26 | 3.56% |
| Valine VAL (V) | 42 | 5.75% |
| Tyrosine TYR (Y) | 32 | 4.38% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3674 |
| Hydrogen | H | 5528 |
| Nitrogen | N | 940 |
| Oxygen | O | 1075 |
| Sulphur | S | 29 |
| Formula | C3674H5528N940O1075S29 |
| Total Number of Atoms: | 11246 |
| Total number of positively charged residues (ARG + LYS): | 62 |
| Total number of negatively charged residues (ASP + GLU): | 75 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 191430 Absorption 0.1% (=1 g/l) 2.363, assuming all pairs of CYS residues form cystines Ext. coefficient 190680 Absorption 0.1% (=1 g/l) 2.354, assuming all CYS residues are reduced |
| Aromaticity: | 0.124 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.18 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.05, 27.91, 21.34] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 73.1053 |
| Grand average of hydropathicity (GRAVY): | -0.27 |