Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4052 |
| Number of amino acids: | 696 |
| Molecular Weight: | 75617.4 Da |
| Theoretical pI: | 4.85 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 32 | 4.6% |
| Cysteine CYS (C) | 28 | 4.02% |
| Glutamic Acid GLU (E) | 27 | 3.88% |
| Aspartic Acid ASP (D) | 49 | 7.04% |
| Glycine GLY (G) | 56 | 8.05% |
| Phynylalanine PHE (F) | 34 | 4.89% |
| Isoleucine ILE (I) | 30 | 4.31% |
| Histidine HIS (H) | 8 | 1.15% |
| Lysine LYS (K) | 35 | 5.03% |
| Methionine MET (M) | 15 | 2.16% |
| Leucine LEU (L) | 61 | 8.76% |
| Asparagine ASN (N) | 46 | 6.61% |
| Glutamine GLN (Q) | 21 | 3.02% |
| Proline PRO (P) | 43 | 6.18% |
| Serine SER (S) | 92 | 13.22% |
| Arginine ARG (R) | 19 | 2.73% |
| Threonine THR (T) | 44 | 6.32% |
| Tryptophan TRP (W) | 8 | 1.15% |
| Valine VAL (V) | 25 | 3.59% |
| Tyrosine TYR (Y) | 23 | 3.3% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3298 |
| Hydrogen | H | 5075 |
| Nitrogen | N | 879 |
| Oxygen | O | 1075 |
| Sulphur | S | 43 |
| Formula | C3298H5075N879O1075S43 |
| Total Number of Atoms: | 10370 |
| Total number of positively charged residues (ARG + LYS): | 54 |
| Total number of negatively charged residues (ASP + GLU): | 76 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 80020 Absorption 0.1% (=1 g/l) 1.058, assuming all pairs of CYS residues form cystines Ext. coefficient 78270 Absorption 0.1% (=1 g/l) 1.035, assuming all CYS residues are reduced |
| Aromaticity: | 0.093 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 44.91 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.01, 34.05, 19.40] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 66.0057 |
| Grand average of hydropathicity (GRAVY): | -0.37 |