Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4050 |
| Number of amino acids: | 827 |
| Molecular Weight: | 91548.53 Da |
| Theoretical pI: | 5.59 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 62 | 7.5% |
| Cysteine CYS (C) | 20 | 2.42% |
| Glutamic Acid GLU (E) | 46 | 5.56% |
| Aspartic Acid ASP (D) | 40 | 4.84% |
| Glycine GLY (G) | 84 | 10.16% |
| Phynylalanine PHE (F) | 34 | 4.11% |
| Isoleucine ILE (I) | 41 | 4.96% |
| Histidine HIS (H) | 18 | 2.18% |
| Lysine LYS (K) | 46 | 5.56% |
| Methionine MET (M) | 19 | 2.3% |
| Leucine LEU (L) | 51 | 6.17% |
| Asparagine ASN (N) | 37 | 4.47% |
| Glutamine GLN (Q) | 31 | 3.75% |
| Proline PRO (P) | 46 | 5.56% |
| Serine SER (S) | 55 | 6.65% |
| Arginine ARG (R) | 23 | 2.78% |
| Threonine THR (T) | 47 | 5.68% |
| Tryptophan TRP (W) | 31 | 3.75% |
| Valine VAL (V) | 59 | 7.13% |
| Tyrosine TYR (Y) | 37 | 4.47% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 4134 |
| Hydrogen | H | 6199 |
| Nitrogen | N | 1077 |
| Oxygen | O | 1207 |
| Sulphur | S | 39 |
| Formula | C4134H6199N1077O1207S39 |
| Total Number of Atoms: | 12656 |
| Total number of positively charged residues (ARG + LYS): | 69 |
| Total number of negatively charged residues (ASP + GLU): | 86 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 226880 Absorption 0.1% (=1 g/l) 2.478, assuming all pairs of CYS residues form cystines Ext. coefficient 225630 Absorption 0.1% (=1 g/l) 2.465, assuming all CYS residues are reduced |
| Aromaticity: | 0.123 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.55 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.59, 26.84, 21.52] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 71.572 |
| Grand average of hydropathicity (GRAVY): | -0.27 |