Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4049 |
| Number of amino acids: | 728 |
| Molecular Weight: | 81532.84 Da |
| Theoretical pI: | 8.06 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 46 | 6.32% |
| Cysteine CYS (C) | 14 | 1.92% |
| Glutamic Acid GLU (E) | 42 | 5.77% |
| Aspartic Acid ASP (D) | 29 | 3.98% |
| Glycine GLY (G) | 64 | 8.79% |
| Phynylalanine PHE (F) | 29 | 3.98% |
| Isoleucine ILE (I) | 40 | 5.49% |
| Histidine HIS (H) | 15 | 2.06% |
| Lysine LYS (K) | 51 | 7.01% |
| Methionine MET (M) | 16 | 2.2% |
| Leucine LEU (L) | 55 | 7.55% |
| Asparagine ASN (N) | 37 | 5.08% |
| Glutamine GLN (Q) | 22 | 3.02% |
| Proline PRO (P) | 41 | 5.63% |
| Serine SER (S) | 51 | 7.01% |
| Arginine ARG (R) | 23 | 3.16% |
| Threonine THR (T) | 51 | 7.01% |
| Tryptophan TRP (W) | 25 | 3.43% |
| Valine VAL (V) | 43 | 5.91% |
| Tyrosine TYR (Y) | 34 | 4.67% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3695 |
| Hydrogen | H | 5616 |
| Nitrogen | N | 962 |
| Oxygen | O | 1066 |
| Sulphur | S | 30 |
| Formula | C3695H5616N962O1066S30 |
| Total Number of Atoms: | 11369 |
| Total number of positively charged residues (ARG + LYS): | 74 |
| Total number of negatively charged residues (ASP + GLU): | 71 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 189035 Absorption 0.1% (=1 g/l) 2.319, assuming all pairs of CYS residues form cystines Ext. coefficient 188160 Absorption 0.1% (=1 g/l) 2.308, assuming all CYS residues are reduced |
| Aromaticity: | 0.121 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 32.43 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.04, 26.51, 21.84] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 74.3407 |
| Grand average of hydropathicity (GRAVY): | -0.33 |