Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4048 |
| Number of amino acids: | 724 |
| Molecular Weight: | 80591.19 Da |
| Theoretical pI: | 8.88 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 55 | 7.6% |
| Cysteine CYS (C) | 14 | 1.93% |
| Glutamic Acid GLU (E) | 34 | 4.7% |
| Aspartic Acid ASP (D) | 28 | 3.87% |
| Glycine GLY (G) | 68 | 9.39% |
| Phynylalanine PHE (F) | 33 | 4.56% |
| Isoleucine ILE (I) | 35 | 4.83% |
| Histidine HIS (H) | 15 | 2.07% |
| Lysine LYS (K) | 52 | 7.18% |
| Methionine MET (M) | 17 | 2.35% |
| Leucine LEU (L) | 55 | 7.6% |
| Asparagine ASN (N) | 35 | 4.83% |
| Glutamine GLN (Q) | 21 | 2.9% |
| Proline PRO (P) | 40 | 5.52% |
| Serine SER (S) | 51 | 7.04% |
| Arginine ARG (R) | 23 | 3.18% |
| Threonine THR (T) | 42 | 5.8% |
| Tryptophan TRP (W) | 26 | 3.59% |
| Valine VAL (V) | 47 | 6.49% |
| Tyrosine TYR (Y) | 33 | 4.56% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3671 |
| Hydrogen | H | 5561 |
| Nitrogen | N | 957 |
| Oxygen | O | 1031 |
| Sulphur | S | 31 |
| Formula | C3671H5561N957O1031S31 |
| Total Number of Atoms: | 11251 |
| Total number of positively charged residues (ARG + LYS): | 75 |
| Total number of negatively charged residues (ASP + GLU): | 62 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 193045 Absorption 0.1% (=1 g/l) 2.395, assuming all pairs of CYS residues form cystines Ext. coefficient 192170 Absorption 0.1% (=1 g/l) 2.385, assuming all CYS residues are reduced |
| Aromaticity: | 0.127 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 33.96 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.63, 26.80, 22.24] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 74.9033 |
| Grand average of hydropathicity (GRAVY): | -0.24 |