Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4041 |
| Number of amino acids: | 774 |
| Molecular Weight: | 83810.3 Da |
| Theoretical pI: | 8.67 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 79 | 10.21% |
| Cysteine CYS (C) | 6 | 0.78% |
| Glutamic Acid GLU (E) | 56 | 7.24% |
| Aspartic Acid ASP (D) | 41 | 5.3% |
| Glycine GLY (G) | 50 | 6.46% |
| Phynylalanine PHE (F) | 23 | 2.97% |
| Isoleucine ILE (I) | 15 | 1.94% |
| Histidine HIS (H) | 10 | 1.29% |
| Lysine LYS (K) | 39 | 5.04% |
| Methionine MET (M) | 16 | 2.07% |
| Leucine LEU (L) | 84 | 10.85% |
| Asparagine ASN (N) | 23 | 2.97% |
| Glutamine GLN (Q) | 19 | 2.45% |
| Proline PRO (P) | 75 | 9.69% |
| Serine SER (S) | 68 | 8.79% |
| Arginine ARG (R) | 63 | 8.14% |
| Threonine THR (T) | 44 | 5.68% |
| Tryptophan TRP (W) | 3 | 0.39% |
| Valine VAL (V) | 50 | 6.46% |
| Tyrosine TYR (Y) | 10 | 1.29% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3667 |
| Hydrogen | H | 5941 |
| Nitrogen | N | 1067 |
| Oxygen | O | 1133 |
| Sulphur | S | 22 |
| Formula | C3667H5941N1067O1133S22 |
| Total Number of Atoms: | 11830 |
| Total number of positively charged residues (ARG + LYS): | 102 |
| Total number of negatively charged residues (ASP + GLU): | 97 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 31775 Absorption 0.1% (=1 g/l) 0.379, assuming all pairs of CYS residues form cystines Ext. coefficient 31400 Absorption 0.1% (=1 g/l) 0.375, assuming all CYS residues are reduced |
| Aromaticity: | 0.047 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 59.64 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [23.90, 27.91, 30.36] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 78.8242 |
| Grand average of hydropathicity (GRAVY): | -0.45 |