Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4039 |
| Number of amino acids: | 202 |
| Molecular Weight: | 22563.31 Da |
| Theoretical pI: | 9.47 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 13 | 6.44% |
| Cysteine CYS (C) | 0 | 0% |
| Glutamic Acid GLU (E) | 12 | 5.94% |
| Aspartic Acid ASP (D) | 4 | 1.98% |
| Glycine GLY (G) | 12 | 5.94% |
| Phynylalanine PHE (F) | 16 | 7.92% |
| Isoleucine ILE (I) | 10 | 4.95% |
| Histidine HIS (H) | 5 | 2.48% |
| Lysine LYS (K) | 7 | 3.47% |
| Methionine MET (M) | 10 | 4.95% |
| Leucine LEU (L) | 18 | 8.91% |
| Asparagine ASN (N) | 3 | 1.49% |
| Glutamine GLN (Q) | 6 | 2.97% |
| Proline PRO (P) | 13 | 6.44% |
| Serine SER (S) | 21 | 10.4% |
| Arginine ARG (R) | 13 | 6.44% |
| Threonine THR (T) | 13 | 6.44% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 20 | 9.9% |
| Tyrosine TYR (Y) | 6 | 2.97% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1027 |
| Hydrogen | H | 1611 |
| Nitrogen | N | 267 |
| Oxygen | O | 284 |
| Sulphur | S | 10 |
| Formula | C1027H1611N267O284S10 |
| Total Number of Atoms: | 3199 |
| Total number of positively charged residues (ARG + LYS): | 20 |
| Total number of negatively charged residues (ASP + GLU): | 16 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 8940 Absorption 0.1% (=1 g/l) 0.396 |
| Aromaticity: | 0.109 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 60.47 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.65, 24.26, 26.24] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 89.2079 |
| Grand average of hydropathicity (GRAVY): | 0.18 |