Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4027 |
| Number of amino acids: | 567 |
| Molecular Weight: | 63409.87 Da |
| Theoretical pI: | 9.24 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 30 | 5.29% |
| Cysteine CYS (C) | 12 | 2.12% |
| Glutamic Acid GLU (E) | 14 | 2.47% |
| Aspartic Acid ASP (D) | 33 | 5.82% |
| Glycine GLY (G) | 43 | 7.58% |
| Phynylalanine PHE (F) | 18 | 3.17% |
| Isoleucine ILE (I) | 38 | 6.7% |
| Histidine HIS (H) | 5 | 0.88% |
| Lysine LYS (K) | 9 | 1.59% |
| Methionine MET (M) | 12 | 2.12% |
| Leucine LEU (L) | 45 | 7.94% |
| Asparagine ASN (N) | 29 | 5.11% |
| Glutamine GLN (Q) | 25 | 4.41% |
| Proline PRO (P) | 26 | 4.59% |
| Serine SER (S) | 59 | 10.41% |
| Arginine ARG (R) | 51 | 8.99% |
| Threonine THR (T) | 42 | 7.41% |
| Tryptophan TRP (W) | 15 | 2.65% |
| Valine VAL (V) | 41 | 7.23% |
| Tyrosine TYR (Y) | 20 | 3.53% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2790 |
| Hydrogen | H | 4386 |
| Nitrogen | N | 808 |
| Oxygen | O | 837 |
| Sulphur | S | 24 |
| Formula | C2790H4386N808O837S24 |
| Total Number of Atoms: | 8845 |
| Total number of positively charged residues (ARG + LYS): | 60 |
| Total number of negatively charged residues (ASP + GLU): | 47 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 113050 Absorption 0.1% (=1 g/l) 1.783, assuming all pairs of CYS residues form cystines Ext. coefficient 112300 Absorption 0.1% (=1 g/l) 1.771, assuming all CYS residues are reduced |
| Aromaticity: | 0.093 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.50 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.22, 27.69, 17.81] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.351 |
| Grand average of hydropathicity (GRAVY): | -0.24 |