Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4019 |
| Number of amino acids: | 451 |
| Molecular Weight: | 49623.01 Da |
| Theoretical pI: | 9.13 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 54 | 11.97% |
| Cysteine CYS (C) | 17 | 3.77% |
| Glutamic Acid GLU (E) | 7 | 1.55% |
| Aspartic Acid ASP (D) | 19 | 4.21% |
| Glycine GLY (G) | 31 | 6.87% |
| Phynylalanine PHE (F) | 17 | 3.77% |
| Isoleucine ILE (I) | 12 | 2.66% |
| Histidine HIS (H) | 10 | 2.22% |
| Lysine LYS (K) | 15 | 3.33% |
| Methionine MET (M) | 15 | 3.33% |
| Leucine LEU (L) | 31 | 6.87% |
| Asparagine ASN (N) | 25 | 5.54% |
| Glutamine GLN (Q) | 18 | 3.99% |
| Proline PRO (P) | 30 | 6.65% |
| Serine SER (S) | 22 | 4.88% |
| Arginine ARG (R) | 26 | 5.76% |
| Threonine THR (T) | 31 | 6.87% |
| Tryptophan TRP (W) | 11 | 2.44% |
| Valine VAL (V) | 39 | 8.65% |
| Tyrosine TYR (Y) | 21 | 4.66% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2213 |
| Hydrogen | H | 3398 |
| Nitrogen | N | 618 |
| Oxygen | O | 621 |
| Sulphur | S | 32 |
| Formula | C2213H3398N618O621S32 |
| Total Number of Atoms: | 6882 |
| Total number of positively charged residues (ARG + LYS): | 41 |
| Total number of negatively charged residues (ASP + GLU): | 26 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 92790 Absorption 0.1% (=1 g/l) 1.870, assuming all pairs of CYS residues form cystines Ext. coefficient 91790 Absorption 0.1% (=1 g/l) 1.850, assuming all CYS residues are reduced |
| Aromaticity: | 0.109 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 32.46 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.05, 23.95, 23.73] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 74.235 |
| Grand average of hydropathicity (GRAVY): | -0.08 |