Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4018 |
| Number of amino acids: | 461 |
| Molecular Weight: | 51752.34 Da |
| Theoretical pI: | 5.64 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 20 | 4.34% |
| Cysteine CYS (C) | 5 | 1.08% |
| Glutamic Acid GLU (E) | 29 | 6.29% |
| Aspartic Acid ASP (D) | 31 | 6.72% |
| Glycine GLY (G) | 36 | 7.81% |
| Phynylalanine PHE (F) | 19 | 4.12% |
| Isoleucine ILE (I) | 25 | 5.42% |
| Histidine HIS (H) | 8 | 1.74% |
| Lysine LYS (K) | 41 | 8.89% |
| Methionine MET (M) | 10 | 2.17% |
| Leucine LEU (L) | 50 | 10.85% |
| Asparagine ASN (N) | 22 | 4.77% |
| Glutamine GLN (Q) | 13 | 2.82% |
| Proline PRO (P) | 19 | 4.12% |
| Serine SER (S) | 35 | 7.59% |
| Arginine ARG (R) | 11 | 2.39% |
| Threonine THR (T) | 22 | 4.77% |
| Tryptophan TRP (W) | 13 | 2.82% |
| Valine VAL (V) | 38 | 8.24% |
| Tyrosine TYR (Y) | 14 | 3.04% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2347 |
| Hydrogen | H | 3655 |
| Nitrogen | N | 599 |
| Oxygen | O | 688 |
| Sulphur | S | 15 |
| Formula | C2347H3655N599O688S15 |
| Total Number of Atoms: | 7304 |
| Total number of positively charged residues (ARG + LYS): | 52 |
| Total number of negatively charged residues (ASP + GLU): | 60 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 92610 Absorption 0.1% (=1 g/l) 1.789, assuming all pairs of CYS residues form cystines Ext. coefficient 92360 Absorption 0.1% (=1 g/l) 1.785, assuming all CYS residues are reduced |
| Aromaticity: | 0.100 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 24.49 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.49, 24.30, 23.64] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 91.692 |
| Grand average of hydropathicity (GRAVY): | -0.22 |