Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4014 |
| Number of amino acids: | 438 |
| Molecular Weight: | 48591.54 Da |
| Theoretical pI: | 5.76 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 38 | 8.68% |
| Cysteine CYS (C) | 7 | 1.6% |
| Glutamic Acid GLU (E) | 14 | 3.2% |
| Aspartic Acid ASP (D) | 37 | 8.45% |
| Glycine GLY (G) | 42 | 9.59% |
| Phynylalanine PHE (F) | 16 | 3.65% |
| Isoleucine ILE (I) | 24 | 5.48% |
| Histidine HIS (H) | 17 | 3.88% |
| Lysine LYS (K) | 21 | 4.79% |
| Methionine MET (M) | 9 | 2.05% |
| Leucine LEU (L) | 31 | 7.08% |
| Asparagine ASN (N) | 19 | 4.34% |
| Glutamine GLN (Q) | 15 | 3.42% |
| Proline PRO (P) | 20 | 4.57% |
| Serine SER (S) | 30 | 6.85% |
| Arginine ARG (R) | 18 | 4.11% |
| Threonine THR (T) | 19 | 4.34% |
| Tryptophan TRP (W) | 16 | 3.65% |
| Valine VAL (V) | 28 | 6.39% |
| Tyrosine TYR (Y) | 17 | 3.88% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2178 |
| Hydrogen | H | 3275 |
| Nitrogen | N | 597 |
| Oxygen | O | 641 |
| Sulphur | S | 16 |
| Formula | C2178H3275N597O641S16 |
| Total Number of Atoms: | 6707 |
| Total number of positively charged residues (ARG + LYS): | 39 |
| Total number of negatively charged residues (ASP + GLU): | 51 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 113705 Absorption 0.1% (=1 g/l) 2.340, assuming all pairs of CYS residues form cystines Ext. coefficient 113330 Absorption 0.1% (=1 g/l) 2.332, assuming all CYS residues are reduced |
| Aromaticity: | 0.112 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 28.56 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.14, 25.34, 21.00] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 76.1872 |
| Grand average of hydropathicity (GRAVY): | -0.33 |