Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4012 |
| Number of amino acids: | 426 |
| Molecular Weight: | 44278.42 Da |
| Theoretical pI: | 9.66 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 22 | 5.16% |
| Cysteine CYS (C) | 7 | 1.64% |
| Glutamic Acid GLU (E) | 6 | 1.41% |
| Aspartic Acid ASP (D) | 10 | 2.35% |
| Glycine GLY (G) | 23 | 5.4% |
| Phynylalanine PHE (F) | 13 | 3.05% |
| Isoleucine ILE (I) | 17 | 3.99% |
| Histidine HIS (H) | 1 | 0.23% |
| Lysine LYS (K) | 30 | 7.04% |
| Methionine MET (M) | 6 | 1.41% |
| Leucine LEU (L) | 40 | 9.39% |
| Asparagine ASN (N) | 12 | 2.82% |
| Glutamine GLN (Q) | 13 | 3.05% |
| Proline PRO (P) | 132 | 30.99% |
| Serine SER (S) | 39 | 9.15% |
| Arginine ARG (R) | 4 | 0.94% |
| Threonine THR (T) | 14 | 3.29% |
| Tryptophan TRP (W) | 3 | 0.7% |
| Valine VAL (V) | 28 | 6.57% |
| Tyrosine TYR (Y) | 6 | 1.41% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2075 |
| Hydrogen | H | 3250 |
| Nitrogen | N | 498 |
| Oxygen | O | 543 |
| Sulphur | S | 13 |
| Formula | C2075H3250N498O543S13 |
| Total Number of Atoms: | 6379 |
| Total number of positively charged residues (ARG + LYS): | 34 |
| Total number of negatively charged residues (ASP + GLU): | 16 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 25815 Absorption 0.1% (=1 g/l) 0.583, assuming all pairs of CYS residues form cystines Ext. coefficient 25440 Absorption 0.1% (=1 g/l) 0.575, assuming all CYS residues are reduced |
| Aromaticity: | 0.052 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 95.68 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.12, 48.36, 17.37] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 76.4084 |
| Grand average of hydropathicity (GRAVY): | -0.24 |