Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4011 |
| Number of amino acids: | 316 |
| Molecular Weight: | 35418.59 Da |
| Theoretical pI: | 8.68 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 23 | 7.28% |
| Cysteine CYS (C) | 4 | 1.27% |
| Glutamic Acid GLU (E) | 21 | 6.65% |
| Aspartic Acid ASP (D) | 15 | 4.75% |
| Glycine GLY (G) | 20 | 6.33% |
| Phynylalanine PHE (F) | 16 | 5.06% |
| Isoleucine ILE (I) | 23 | 7.28% |
| Histidine HIS (H) | 2 | 0.63% |
| Lysine LYS (K) | 26 | 8.23% |
| Methionine MET (M) | 4 | 1.27% |
| Leucine LEU (L) | 28 | 8.86% |
| Asparagine ASN (N) | 20 | 6.33% |
| Glutamine GLN (Q) | 9 | 2.85% |
| Proline PRO (P) | 11 | 3.48% |
| Serine SER (S) | 20 | 6.33% |
| Arginine ARG (R) | 14 | 4.43% |
| Threonine THR (T) | 22 | 6.96% |
| Tryptophan TRP (W) | 3 | 0.95% |
| Valine VAL (V) | 22 | 6.96% |
| Tyrosine TYR (Y) | 13 | 4.11% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1596 |
| Hydrogen | H | 2522 |
| Nitrogen | N | 420 |
| Oxygen | O | 473 |
| Sulphur | S | 8 |
| Formula | C1596H2522N420O473S8 |
| Total Number of Atoms: | 5019 |
| Total number of positively charged residues (ARG + LYS): | 40 |
| Total number of negatively charged residues (ASP + GLU): | 36 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 36120 Absorption 0.1% (=1 g/l) 1.020, assuming all pairs of CYS residues form cystines Ext. coefficient 35870 Absorption 0.1% (=1 g/l) 1.013, assuming all CYS residues are reduced |
| Aromaticity: | 0.101 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 12.68 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.23, 22.47, 24.05] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 90.4114 |
| Grand average of hydropathicity (GRAVY): | -0.22 |