Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4009 |
| Number of amino acids: | 377 |
| Molecular Weight: | 41627.84 Da |
| Theoretical pI: | 6.92 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 36 | 9.55% |
| Cysteine CYS (C) | 8 | 2.12% |
| Glutamic Acid GLU (E) | 19 | 5.04% |
| Aspartic Acid ASP (D) | 15 | 3.98% |
| Glycine GLY (G) | 31 | 8.22% |
| Phynylalanine PHE (F) | 11 | 2.92% |
| Isoleucine ILE (I) | 15 | 3.98% |
| Histidine HIS (H) | 21 | 5.57% |
| Lysine LYS (K) | 15 | 3.98% |
| Methionine MET (M) | 7 | 1.86% |
| Leucine LEU (L) | 33 | 8.75% |
| Asparagine ASN (N) | 23 | 6.1% |
| Glutamine GLN (Q) | 18 | 4.77% |
| Proline PRO (P) | 20 | 5.31% |
| Serine SER (S) | 20 | 5.31% |
| Arginine ARG (R) | 17 | 4.51% |
| Threonine THR (T) | 27 | 7.16% |
| Tryptophan TRP (W) | 7 | 1.86% |
| Valine VAL (V) | 21 | 5.57% |
| Tyrosine TYR (Y) | 13 | 3.45% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1838 |
| Hydrogen | H | 2831 |
| Nitrogen | N | 533 |
| Oxygen | O | 547 |
| Sulphur | S | 15 |
| Formula | C1838H2831N533O547S15 |
| Total Number of Atoms: | 5764 |
| Total number of positively charged residues (ARG + LYS): | 32 |
| Total number of negatively charged residues (ASP + GLU): | 34 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 58370 Absorption 0.1% (=1 g/l) 1.402, assuming all pairs of CYS residues form cystines Ext. coefficient 57870 Absorption 0.1% (=1 g/l) 1.390, assuming all CYS residues are reduced |
| Aromaticity: | 0.082 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 30.24 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.53, 24.93, 25.20] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 75.3581 |
| Grand average of hydropathicity (GRAVY): | -0.42 |