Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4006 |
| Number of amino acids: | 502 |
| Molecular Weight: | 56239.76 Da |
| Theoretical pI: | 8.57 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 33 | 6.57% |
| Cysteine CYS (C) | 8 | 1.59% |
| Glutamic Acid GLU (E) | 23 | 4.58% |
| Aspartic Acid ASP (D) | 26 | 5.18% |
| Glycine GLY (G) | 37 | 7.37% |
| Phynylalanine PHE (F) | 21 | 4.18% |
| Isoleucine ILE (I) | 19 | 3.78% |
| Histidine HIS (H) | 14 | 2.79% |
| Lysine LYS (K) | 26 | 5.18% |
| Methionine MET (M) | 8 | 1.59% |
| Leucine LEU (L) | 52 | 10.36% |
| Asparagine ASN (N) | 22 | 4.38% |
| Glutamine GLN (Q) | 14 | 2.79% |
| Proline PRO (P) | 24 | 4.78% |
| Serine SER (S) | 48 | 9.56% |
| Arginine ARG (R) | 28 | 5.58% |
| Threonine THR (T) | 30 | 5.98% |
| Tryptophan TRP (W) | 8 | 1.59% |
| Valine VAL (V) | 33 | 6.57% |
| Tyrosine TYR (Y) | 28 | 5.58% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2526 |
| Hydrogen | H | 3888 |
| Nitrogen | N | 684 |
| Oxygen | O | 743 |
| Sulphur | S | 16 |
| Formula | C2526H3888N684O743S16 |
| Total Number of Atoms: | 7857 |
| Total number of positively charged residues (ARG + LYS): | 54 |
| Total number of negatively charged residues (ASP + GLU): | 49 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 86220 Absorption 0.1% (=1 g/l) 1.533, assuming all pairs of CYS residues form cystines Ext. coefficient 85720 Absorption 0.1% (=1 g/l) 1.524, assuming all CYS residues are reduced |
| Aromaticity: | 0.114 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 43.41 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.07, 26.10, 23.11] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 80.797 |
| Grand average of hydropathicity (GRAVY): | -0.30 |